It includes algorithms for secondary structure prediction, including facility to predict base pairing probabilities.It also can be used to predict bimolecular structures and can predict the equilibrium binding affinity of an oligonucleotide to a structured RNA target.It can also predict secondary structures common to two, unaligned sequences, which is much more accurate than single sequence secondary structure prediction.Finally, RNAstructure can take a number of different types of experiment mapping data to constrain or restrain structure prediction.
These include chemical mapping, enzymatic mapping, NMR, and SHAPE data. The source code includes a set of C classes for convenient inclusion of the methods into new programs. We ask you to register before downloading so that we may occasionally notify you of significant updates and to track the number of users to make a case for continued support by funding agencies. Structure Software Free Of ChargeRNAstructure is free of charge and provided under the GNU public license. Structure Software Full Package ToIf you need to perform long-running calculations or these limits are not sufficient for your application, please consider downloading the full package to run the software locally. If you want to know more or withdraw your consent to all or some of the cookies, please refer to the cookie policy. By closing this banner, scrolling this page, clicking a link or continuing to browse otherwise, you agree to the use of cookies. StructureScan is a trademark and Lowrance and Navico are registered trademarks of Navico, Inc. Navico may find it necessary to change or end our policies, regulations and special offers at any time. StructureScan Consists of two powerful sonar views: Sidescan and Downscan. Used in conjunction with the built-in broadband sounder, StructureScan gives you an underwater panoramic view. Sidescan Sidescan Broadcasts a sonar beam to each side of your boat allowing you to view structure, and terrain without having to drive your boat over the top of it. Screen Configurations StructureScan can be shown with other pages in various screen configurations including: splitscreen, tri-screen (HDS-810 only) and quad screen (HDS-810 only). Structure Press the keypad leftright to rotate the carousel menu until is selected. Press the keypad updown to select the desired combination of panels and press EntEr. Structure Structure Splitscreen Structure Structure Sonar Chart Quadscreen (HDS -810 only). Structure menu To make adjustments, highlight Contrast on the StructureScan menu and press the keypad leftright to decreaseincrease the contrast level. In a multi-panel display, you can select different views for each StructureScan panel. To select a View: View menu View from the StructureScan menu and press EntEr. Structure Options menu Structure Surface Clarity Adjusts sensitivity near the surface of the water to reduce or eliminate onscreen clutter caused by wave action, boat wakes, temperature inversion, etc. Highlight Use the keypad to move the cursor into the desired position. To measure the distance from the selected location to another object or location press EntEr and move the cursor. When logging all channels, logs are saved Log All Channels in.Sl2 format instead of.slg format. The.Sl2 file format is not compatible with non-HDS units. To select a source: Source from the Structure menu and press EntEr. NOTE: You can save a waypoint by moving the cursor into the desired position and pressing Enter or the Wpt key from the StructureScan or Sonar pages. Please contact your nearest distributor if you require any further assistance. Structure Software Install And UseIt is the owners sole responsibility to install and use the instrument and transducers in a manner that will not cause accidents, personal injury or property damage.
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